AnalysisMethod¶
Description¶
An Analysis Method captures the workflow steps that were performed to analyze data obtained from an Experiment.
Fields¶
name¶
description : A name identifying this Analysis Method.
required : True
data type : string
description¶
description : Description of an entity.
required : True
data type : string
type¶
description : The type of an entity. Note: Not to be confused with rdf:type.
required : True
data type : string
workflow_name¶
description : The workflow name.
required : True
data type : string
workflow_version¶
description : The workflow version.
required : False
data type : string
workflow_repository¶
description : The workflow repository (e.g., the URL).
required : True
data type : string
workflow_doi¶
description : A digital object identifier for the workflow. Can be a publication or the workflow commit that was used for the Analysis.
required : True
data type : string
workflow_tasks¶
description : Tasks performed by the workflow
required : False
data type : string
parameters¶
description : Key/value pairs where key corresponds to a parameter name and value corresponds to a parameter value (e.g., 'aligner' = 'star_salmon', 'hisat2_build_memory' = '200.GB', 'split_fastq' = 50000000).
required : False
data type : Attribute
software_versions¶
description : key/value pairs where key corresponds to a software name and value corresponds to a version descriptor (e.g., salmon = '1.3.0', trim-galore = '0.6.6', bedtools = '2.29.2').
required : False
data type : Attribute
alias¶
description : The alias for an entity at the time of submission.
required : True
data type : string